Package: dyndimred
Type: Package
Title: Dimensionality Reduction Methods in a Common Format
Version: 1.0.4
Authors@R: c(
    person(
      "Robrecht", "Cannoodt", 
      email = "rcannood@gmail.com", 
      role = c("aut", "cre"),
      comment = c(ORCID = "0000-0003-3641-729X", github = "rcannood")
    ),
    person(
      "Wouter", "Saelens", 
      email = "wouter.saelens@gmail.com", 
      role = c("aut"), 
      comment = c(ORCID = "0000-0002-7114-6248", github = "zouter")
    )
  )
Description: Provides a common interface for applying dimensionality
        reduction methods, such as Principal Component Analysis
        ('PCA'), Independent Component Analysis ('ICA'), diffusion
        maps, Locally-Linear Embedding ('LLE'), t-distributed
        Stochastic Neighbor Embedding ('t-SNE'), and Uniform Manifold
        Approximation and Projection ('UMAP'). Has built-in support for
        sparse matrices.
License: MIT + file LICENSE
Encoding: UTF-8
Imports: dynutils (>= 1.0.5), irlba, lmds, stats, tibble
Suggests: testthat, diffusionMap, fastICA, igraph, lle, MASS, Matrix,
        RANN, Rtsne, smacof, uwot
RoxygenNote: 7.1.1
Roxygen: list(markdown = TRUE)
URL: https://github.com/dynverse/dyndimred
BugReports: https://github.com/dynverse/dyndimred/issues
Config/pak/sysreqs: git libicu-dev
Repository: https://dynverse.r-universe.dev
Date/Publication: 2021-03-23 08:50:42 UTC
RemoteUrl: https://github.com/dynverse/dyndimred
RemoteRef: HEAD
RemoteSha: b85e9f42a78bcf44e4e5de31beefa56a9cecf604
NeedsCompilation: no
Packaged: 2026-06-14 07:22:34 UTC; root
Author: Robrecht Cannoodt [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-3641-729X>, github: rcannood),
  Wouter Saelens [aut] (ORCID: <https://orcid.org/0000-0002-7114-6248>,
    github: zouter)
Maintainer: Robrecht Cannoodt <rcannood@gmail.com>