Package: dyndimred 1.0.4

Robrecht Cannoodt

dyndimred: Dimensionality Reduction Methods in a Common Format

Provides a common interface for applying dimensionality reduction methods, such as Principal Component Analysis ('PCA'), Independent Component Analysis ('ICA'), diffusion maps, Locally-Linear Embedding ('LLE'), t-distributed Stochastic Neighbor Embedding ('t-SNE'), and Uniform Manifold Approximation and Projection ('UMAP'). Has built-in support for sparse matrices.

Authors:Robrecht Cannoodt [aut, cre], Wouter Saelens [aut]

dyndimred_1.0.4.tar.gz
dyndimred_1.0.4.zip(r-4.5)dyndimred_1.0.4.zip(r-4.4)dyndimred_1.0.4.zip(r-4.3)
dyndimred_1.0.4.tgz(r-4.4-any)dyndimred_1.0.4.tgz(r-4.3-any)
dyndimred_1.0.4.tar.gz(r-4.5-noble)dyndimred_1.0.4.tar.gz(r-4.4-noble)
dyndimred_1.0.4.tgz(r-4.4-emscripten)dyndimred_1.0.4.tgz(r-4.3-emscripten)
dyndimred.pdf |dyndimred.html
dyndimred/json (API)
NEWS

# Install 'dyndimred' in R:
install.packages('dyndimred', repos = c('https://dynverse.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/dynverse/dyndimred/issues

On CRAN:

15 exports 7 stars 1.40 score 31 dependencies 21 scripts 313 downloads

Last updated 3 years agofrom:b85e9f42a7. Checks:OK: 1 NOTE: 5 ERROR: 1. Indexed: yes.

TargetResultDate
Doc / VignettesOKSep 17 2024
R-4.5-winNOTESep 17 2024
R-4.5-linuxNOTESep 17 2024
R-4.4-winNOTESep 17 2024
R-4.4-macNOTESep 17 2024
R-4.3-winNOTESep 17 2024
R-4.3-macERRORSep 17 2024

Exports:dimreddimred_dm_destinydimred_dm_diffusionmapdimred_icadimred_knn_frdimred_landmark_mdsdimred_lledimred_mdsdimred_mds_isomdsdimred_mds_sammondimred_mds_smacofdimred_pcadimred_tsnedimred_umaplist_dimred_methods

Dependencies:assertthatclicrayondescdplyrdynutilsfansigenericsglueirlbalatticelifecyclelmdsmagrittrMatrixpillarpkgconfigproxyCpurrrR6RcppRcppArmadilloremotesrlangstringistringrtibbletidyselectutf8vctrswithr

Readme and manuals

Help Manual

Help pageTopics
Perform simple dimensionality reductiondimred dimred_dm_destiny dimred_dm_diffusionmap dimred_ica dimred_knn_fr dimred_landmark_mds dimred_lle dimred_mds dimred_mds_isomds dimred_mds_sammon dimred_mds_smacof dimred_pca list_dimred_methods
tSNEdimred_tsne
UMAPdimred_umap
Common dimensionality reduction methodsdyndimred