Package: dyndimred 1.0.4

Robrecht Cannoodt

dyndimred: Dimensionality Reduction Methods in a Common Format

Provides a common interface for applying dimensionality reduction methods, such as Principal Component Analysis ('PCA'), Independent Component Analysis ('ICA'), diffusion maps, Locally-Linear Embedding ('LLE'), t-distributed Stochastic Neighbor Embedding ('t-SNE'), and Uniform Manifold Approximation and Projection ('UMAP'). Has built-in support for sparse matrices.

Authors:Robrecht Cannoodt [aut, cre], Wouter Saelens [aut]

dyndimred_1.0.4.tar.gz
dyndimred_1.0.4.zip(r-4.7)dyndimred_1.0.4.zip(r-4.6)dyndimred_1.0.4.zip(r-4.5)
dyndimred_1.0.4.tgz(r-4.6-any)dyndimred_1.0.4.tgz(r-4.5-any)
dyndimred_1.0.4.tar.gz(r-4.7-any)dyndimred_1.0.4.tar.gz(r-4.6-any)
dyndimred_1.0.4.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
dyndimred/json (API)
NEWS

# Install 'dyndimred' in R:

install.packages('dyndimred', repos = c('https://dynverse.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/dynverse/dyndimred/issues

On CRAN:

4.39 score 8 stars 31 scripts 260 downloads 15 exports 30 dependencies

Last updated from:b85e9f42a7. Checks:9 OK. Indexed: yes.

Target	Result	Time
linux-devel-x86_64	OK	222
source / vignettes	OK	283
linux-release-x86_64	OK	216
macos-release-arm64	OK	153
macos-oldrel-arm64	OK	182
windows-devel	OK	169
windows-release	OK	123
windows-oldrel	OK	166
wasm-release	OK	155

Exports:dimred dimred_dm_destiny dimred_dm_diffusionmap dimred_ica dimred_knn_fr dimred_landmark_mds dimred_lle dimred_mds dimred_mds_isomds dimred_mds_sammon dimred_mds_smacof dimred_pca dimred_tsne dimred_umap list_dimred_methods

Dependencies:assertthat cli crayon desc dplyr dynutils generics glue irlba lattice lifecycle lmds magrittr Matrix pillar pkgconfig proxyC purrr R6 Rcpp RcppArmadillo remotes rlang stringi stringr tibble tidyselect utf8 vctrs withr

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Perform simple dimensionality reduction	dimred dimred_dm_destiny dimred_dm_diffusionmap dimred_ica dimred_knn_fr dimred_landmark_mds dimred_lle dimred_mds dimred_mds_isomds dimred_mds_sammon dimred_mds_smacof dimred_pca list_dimred_methods
tSNE	dimred_tsne
UMAP	dimred_umap
Common dimensionality reduction methods	dyndimred